Brassica Database

Oleracea genome and comparisons with its relatives. Although a few Brassica databases existed previously Bolbase is the first comprehensive database with a focus on the B.

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Oilseed rape Brassica napus was formed 7500 years ago by hybridisation between B.

Brassica database. Including snps and functional annotation of genes. BRAD the genetics and genomics database for Brassica plants. Napus pangenome GBrowse Fast Keyword Search.

21995777 Cheng F Liu S Wu J Fang L Sun S Liu B Li P Hua W Wang X. Brassica species include both vegetable and oilseed crops which are very important to the daily life of. OverviewCode created in.

Rapa obtained in cultivation principally in eastern Asia. Brassica napus GBrowse Viewers and Search. However many Brassicaceae genomes have been sequenced and released after its construction.

About this species Ensembl Plants release 51 -. Brassica species belong to the Brassicaceae family which contains about 3700 species from 338. We therefore developed the Brassica Expression Database BrassicaEDB for the research community.

Together with more ancient polyploidsations this conferred an aggregate 72-fold genome multiplication since the origin of angiosperms and high gene content. The genus Brassica contains several economically important crops including rapeseed Brassica napus 2 n 38 AACC the second largest source of seed oil and protein meal worldwide. BrassicaEDB - A Gene Expression Database for Brassica Crops.

BRAD the genetics and genomics database for Brassica plants Abstract. We conducted RNA sequencing RNA-Seq of 103 tissues from rapeseed cultivar ZhongShuang11 ZS11 at seven developmental stages seed germination seedling bolting initial flowering full-bloom podding and. This site hosts Brassica genome databases.

The objectives of this database are to support rationalization of Brassica germplasm conservation and to improve the access to the Brassica germplasm for users. Some varieties are leafy vegetables while others are used to produce mustard from the seeds. Fast search on functional annotation of genes.

Oleracea followed by chromosome doubling a process known as allopolyploidy. The Brassica database BRAD is a web-based database of genetic data at the whole genome scale for important Brassica crops. In the current BrassicaEDB we only focused on the transcriptome level in rapeseed.

These genomes are rich resources for comparative genomics gene annotation and functional. The European database for Brassica abbreviated Bras-EDB was developed by the Centre for Genetic Resources The Netherlands CGN. Napus cultivar Tapidor genome browser.

We therefore developed the Brassica Expression Database BrassicaEDB for the research community. Oilseed rape Brassica napus L was formed 7500 years ago by hybridization between B. A developing online-accessible knowledge and database system of cross-referenced information and resources on Brassicaceae Cruciferae taxonomy systematics and evolution including chromosome numbers traits and characters germplasm resources and accurate enumeration of all species genera and tribes.

The database focuses on passport data of the genus. Graham King Southern Cross University provides no express or implied warranties of any kind including but not limited to those of merchantability fitness for a particular purpose and non-infringement of the proprietary rights such as copyrights patents and trade secrets of third parties. In the current BrassicaEDB we only focused on the transcriptome level in rapeseed.

The Brassica database BRAD was built initially to assist users apply Brassica rapa and Arabidopsis thaliana genomic data efficiently to their research. Oleracea followed by chromosome doubling a process known as allopolyploidy. However research in rapeseed is hampered because it is complicated and time-consuming for researchers to access different types of expression data.

However research in rapeseed is hampered because it is complicated and time-consuming for researchers to access different types of expression data. Links to available Brassica genome viewer and search are below. A hybrid between B.

Together with more ancient polyploidizations this conferred an aggregate 72x genome multiplication since the origin of angiosperms and high gene content.

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